MCP server exposing 2 tools for pride.
This URL is a JSON-RPC 2.0 endpoint over HTTP. Issue POST requests with a JSON-RPC body. Browsers and search crawlers land here on GET.
POST https://gateway.pipeworx.io/pride/mcp
Content-Type: application/json
{"jsonrpc":"2.0","id":1,"method":"tools/list"}search_projects — Search EBI PRIDE Archive — the largest public proteomics/mass-spectrometry dataset repository — for projects by keyword (disease, organism, technique, protein, instrument). Returns matching project accessions with title, organisms, diseases, and instruments. Keyless.get_project — Get full metadata for one PRIDE Archive proteomics project by accession (e.g. "PXD000001"): title, description, sample-processing and data-processing protocols, organisms, organism parts, diseases, instruments, keywords, and DOI.Code samples (curl / TypeScript / one-click client install), schemas, and the live playground are on the pack page:
https://pipeworx.io/packs/pride/
Pipeworx is an open MCP gateway connecting AI agents to live data. pipeworx.io