metabolights 2 tools

MCP server exposing 2 tools for metabolights.

Endpoint

This URL is a JSON-RPC 2.0 endpoint over HTTP. Issue POST requests with a JSON-RPC body. Browsers and search crawlers land here on GET.

POST https://gateway.pipeworx.io/metabolights/mcp
Content-Type: application/json

{"jsonrpc":"2.0","id":1,"method":"tools/list"}

Tools

• search_studies — Search EBI MetaboLights, the metabolomics (metabolite / small-molecule) study repository, by keyword — disease, metabolite, organism, or analytical technique (e.g. "diabetes", "glucose NMR", "Homo sapiens LC-MS"). Returns matching study accessions (e.g. MTBLS1) with name and a short description.
• get_study — Fetch metadata for a single MetaboLights study by its accession (e.g. "MTBLS1"): title, full description, and the organisms studied (species + tissue/part). Keyless.

Full documentation

Code samples (curl / TypeScript / one-click client install), schemas, and the live playground are on the pack page:
https://pipeworx.io/packs/metabolights/

About Pipeworx

Pipeworx is an open MCP gateway connecting AI agents to live data. pipeworx.io